Live, but not heat-killed bacteria significantly induced c-Fos expression in the basolateral and central amygdala, ventral hippocampus, periaqueductal grey, dorsal raphe nucleus, and locus coeruleus. Both live and heat-killed bacteria increased c-Fos expression in the paraventricular nucleus of the thalamus and facilitated firing of vagal fibres, absent behavioural changes. Severing the vagus prevented JB-1-induced c-Fos immunoreactivity in all regions except the ventral hippocampus and dorsal raphe nucleus. Only chronic, not acute treatment induced widespread ΔFosB in distributed brain regions, some of which previously exhibited no c-Fos response to a single dose.